STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUB2OTU deubiquitinase, ubiquitin aldehyde binding 2. (351 aa)    
Predicted Functional Partners:
USP3
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.799
OTULIN
OTU deubiquitinase with linear linkage specificity.
      
 0.763
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.752
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.711
LOC102150222
Ubiquitin-conjugating enzyme E2 N-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.709
UBE2N
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.709
FOXN2
Forkhead box N2.
    
 
 0.708
UBE2D1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.678
RNF128
Ring finger protein 128.
    
 0.653
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.647
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.