STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH10Protocadherin 10. (1047 aa)    
Predicted Functional Partners:
SLC35D3
Solute carrier family 35 member D3.
      
 0.770
TMEM230
UPF0414 transmembrane protein C20orf30-like protein-like protein.
      
 0.770
PNKD
PNKD metallo-beta-lactamase domain containing.
      
 0.770
CCDC88A
Coiled-coil domain containing 88A.
     
 0.672
MEGF6
Multiple EGF like domains 6.
    
 0.583
CTNNAL1
Catenin alpha like 1.
    
 0.576
BTBD7
BTB domain containing 7.
      
 0.565
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.551
PDE1B
NCK associated protein 1 like.
    
 0.519
CHD4
Chromodomain helicase DNA binding protein 4.
    
 0.496
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.