STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102148307Uncharacterized protein. (1199 aa)    
Predicted Functional Partners:
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
      
 0.644
SLC45A4
Solute carrier family 45 member 4.
      
 0.514
DENND3
DENN domain containing 3.
      
 0.482
TRAPPC9
Trafficking protein particle complex 9.
      
 0.477
ENSECAP00000030224
Uncharacterized protein.
      
 0.475
CHRAC1
CBFD_NFYB_HMF domain-containing protein.
      
 0.475
PTK2
Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.443
LOC100059263
RRM domain-containing protein.
  
    0.429
ENSECAP00000033274
Ig-like domain-containing protein.
  
     0.406
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.