STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGBL3ATP/GTP binding protein like 3. (919 aa)    
Predicted Functional Partners:
TMEM247
Transmembrane protein 247.
      
 0.679
SVOPL
SVOP like.
      
 0.674
R3HCC1
R3H domain and coiled-coil containing 1.
      
 0.671
LIN28B
Lin-28 homolog B.
      
 0.650
ZNF385D
Zinc finger protein 385D.
     
 0.635
MOCS1
Molybdenum cofactor synthesis 1.
      
 0.564
ZHX3
Zinc fingers and homeoboxes 3.
      
 0.540
PAPLN
Papilin, proteoglycan like sulfated glycoprotein.
      
 0.533
IGF2R
Insulin like growth factor 2 receptor.
      
 0.477
KLHDC1
Kelch domain containing 1.
      
 0.471
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.