STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111771969Pentatricopeptide repeat domain 3. (738 aa)    
Predicted Functional Partners:
MRPS31
Mitochondrial ribosomal protein S31.
    
 0.992
MRPS5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.992
MRPS10
Mitochondrial ribosomal protein S10.
    
 0.991
MRPS35
Mitochondrial ribosomal protein S35.
    
 0.988
MRPS33
Mitochondrial ribosomal protein S33.
    
  0.988
MRPS24
Mitochondrial ribosomal protein S24.
    
 0.985
DAP3
Death associated protein 3.
   
 0.959
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.952
MRPS27
Mitochondrial ribosomal protein S27.
   
 0.951
MRPS22
Mitochondrial ribosomal protein S22.
   
 0.948
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.