STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTNADystrobrevin alpha. (847 aa)    
Predicted Functional Partners:
SNTB2
Syntrophin beta 2.
    
 
 0.809
RSPH3
Radial spoke head 3.
    
   0.772
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.772
SNTB1
Syntrophin beta 1.
    
 
 0.670
LRRFIP2
LRR binding FLII interacting protein 2.
      
 0.636
SNTG2
Syntrophin gamma 2.
    
 
 0.606
SNTG1
Syntrophin gamma 1.
    
 
 0.602
FAM136A
Family with sequence similarity 136 member A.
      
 0.571
UTRN
Utrophin.
   
 
0.552
HMX3
H6 family homeobox 3.
   
   0.551
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.