STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRCDPhotoreceptor disc component. (54 aa)    
Predicted Functional Partners:
CCDC66
Coiled-coil domain containing 66.
      
 0.904
SLC4A3
Anion exchange protein.
      
 0.803
TTC8
Tetratricopeptide repeat domain 8.
      
 0.800
RNF123
Ring finger protein 123.
      
 0.770
MESD
Mesoderm development LRP chaperone.
      
 0.761
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.738
PDE6B
Phosphodiesterase.
      
 0.721
TULP1
Tubby-like protein; Belongs to the TUB family.
      
 0.702
RHO
Rhodopsin.
      
 0.696
RPGR
Uncharacterized protein.
      
 0.670
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.