STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100070407ABC transporter domain-containing protein. (230 aa)    
Predicted Functional Partners:
LOC100146242
ABC transmembrane type-1 domain-containing protein.
 
  
  0.994
LOC102149590
Uncharacterized protein.
 
     0.938
HCAR1
Hydroxycarboxylic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.909
ABCD3
ATP binding cassette subfamily D member 3.
  
0.877
LGALS12
Galectin.
   
  
 0.855
AHDC1
AT-hook DNA binding motif containing 1.
      
 0.694
PEX3
Peroxisomal biogenesis factor 3.
   
 0.655
MRRF
Mitochondrial ribosome recycling factor.
      
 0.649
PEX13
Peroxisomal biogenesis factor 13.
   
 
 0.643
HNF1A
HNF1 homeobox A.
      
 0.587
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.