STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARNPSAP domain containing ribonucleoprotein. (212 aa)    
Predicted Functional Partners:
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.990
DDX39B
DExD-box helicase 39B.
   
 0.986
CHTOP
Chromatin target of PRMT1.
   
 0.980
ALYREF
Aly/REF export factor.
   
 0.967
ZC3H11A
Uncharacterized protein.
    
 0.958
THOC3
THO complex 3.
   
 
 0.945
DDX39A
DExD-box helicase 39A.
   
 0.915
THOC1
THO complex 1.
   
 0.912
ENSECAP00000037755
FoP_duplication domain-containing protein.
   
 0.906
THOC7
THO complex subunit 7-like protein-like protein.
   
 0.899
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.