STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF11Ring finger protein 11. (179 aa)    
Predicted Functional Partners:
TAX1BP1
Tax1 binding protein 1.
   
 
 0.912
ITCH
E3 ubiquitin-protein ligase.
    
 0.815
SMURF2
E3 ubiquitin-protein ligase.
    
 0.806
TNFAIP3
TNF alpha induced protein 3.
   
 
 0.735
WWP1
E3 ubiquitin-protein ligase.
   
 0.702
HBP1
HMG-box transcription factor 1.
      
 0.696
EFCAB2
EF-hand domain-containing protein.
   
 0.675
RNF25
Ring finger protein 25.
      
 0.673
UBE2N
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.667
LOC102150222
Ubiquitin-conjugating enzyme E2 N-like protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.666
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.