STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT2D3Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (218 aa)    
Predicted Functional Partners:
LOC100060997
Uncharacterized protein.
      
 0.770
GOLT1B
Vesicle transport protein GOT1B-like protein.
   
 
 0.712
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 
 0.682
CNOT9
Phosphoinositide phospholipase C.
      
 0.673
HSPB7
Heat shock protein family B (small) member 7; Belongs to the small heat shock protein (HSP20) family.
      
 0.622
GOLT1A
Golgi transport 1A.
   
 
 0.576
FYCO1
FYVE and coiled-coil domain containing 1.
      
 0.569
PDLIM1
PDZ and LIM domain 1.
      
 0.566
ENSECAP00000027234
Fe-S_biosyn domain-containing protein.
      
 0.483
TRAPPC3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
      
 0.474
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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