STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKX1-1NK1 homeobox 1. (398 aa)    
Predicted Functional Partners:
CCDC155
Coiled-coil domain containing 155.
    
 
 0.575
INCA1
Inhibitor of CDK, cyclin A1 interacting protein 1.
      
 0.574
PSAPL1
Proactivator polypeptide-like 1; May activate the lysosomal degradation of sphingolipids.
      
 0.564
PXT1
Peroxisomal testis enriched protein 1.
      
 0.538
DMC1
Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.
      
 0.514
ASB9
Ankyrin repeat and SOCS box containing 9.
     
 0.494
MSC
Musculin.
      
 0.485
RRAD
GTP-binding protein; Belongs to the small GTPase superfamily. RGK family.
    
 0.480
CLIC6
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.474
UPP1
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
      
 0.471
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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