STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECAP00000033281KRAB domain-containing protein. (128 aa)    
Predicted Functional Partners:
FGGY
FGGY carbohydrate kinase domain containing.
    
 0.585
ANAPC11
RING-type domain-containing protein.
      
 0.571
TSPAN9
Tetraspanin.
      
 0.541
GAS7
Growth arrest specific 7.
    
 0.518
RAB4A
RAB4A, member RAS oncogene family.
    
 0.491
UBAP1
Ubiquitin associated protein 1.
      
 0.487
RBM22
RNA binding motif protein 22.
      
 0.483
ELOVL2
Elongation of very long chain fatty acids protein.
    
 
 0.476
RMI1
RecQ mediated genome instability 1.
      
 0.470
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
      
 0.410
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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