STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECAP00000033322Ig-like domain-containing protein; Belongs to the MHC class I family. (306 aa)    
Predicted Functional Partners:
RPA2
Replication protein A2.
   
 0.732
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).
   
 0.732
CD8A
CD8a molecule.
   
 0.669
ENSECAP00000032802
DUF1968 domain-containing protein.
    
  0.544
TAPBP
TAP binding protein.
 
 
 0.486
SASS6
SAS-6 centriolar assembly protein.
   
  0.463
STN1
STN1 subunit of CST complex.
   
  0.463
PDIA3
Protein disulfide-isomerase.
    
 0.462
CD3E
CD3e molecule.
    
 0.461
CD8B
Ig-like domain-containing protein.
    
 0.457
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.