STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP1SUMO specific peptidase 1. (691 aa)    
Predicted Functional Partners:
SUMO1
Small ubiquitin like modifier 1.
   
 0.993
LOC100049890
Small ubiquitin-related modifier.
   
 0.981
SUMO3
Small ubiquitin-related modifier.
   
 0.981
SUMO2
Small ubiquitin like modifier 2.
   
 0.937
RANGAP1
Ran GTPase activating protein 1.
   
 
 0.921
F6SSM4_HORSE
Ubiquitin-like domain-containing protein.
   
 0.814
PIAS4
Protein inhibitor of activated STAT 4.
   
 
 0.788
SENP7
SUMO specific peptidase 7.
   
0.771
SENP6
SUMO specific peptidase 6.
   
0.765
SAE1
SUMO1 activating enzyme subunit 1.
   
 
 0.764
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.