STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100064979Uncharacterized protein. (469 aa)    
Predicted Functional Partners:
CDK17
Cyclin dependent kinase 17.
     
 0.477
PPP1R1C
Protein phosphatase 1 regulatory inhibitor subunit 1C.
   
  
 0.474
SUSD4
Sushi domain containing 4.
   
  
 0.472
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.467
CDK20
Cyclin dependent kinase 20; Belongs to the protein kinase superfamily.
      
 0.467
FIGN
Fidgetin, microtubule severing factor; Belongs to the AAA ATPase family.
   
 0.445
MGAT2
Mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.
      
 0.442
FIGNL2
Fidgetin like 2.
   
 0.442
LYPD1
LY6/PLAUR domain containing 1.
   
  
 0.415
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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