STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELOBElongin B. (118 aa)    
Predicted Functional Partners:
ELOC
Elongin C; Belongs to the SKP1 family.
   
 0.999
RNF7
Ring finger protein 7.
   
 0.999
RBX1
Ring-box 1.
   
 0.999
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.999
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.999
VHL
Uncharacterized protein.
    
 0.998
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.993
EPAS1
Endothelial PAS domain protein 1.
    
 0.979
NEDD8
NEDD8 ubiquitin like modifier.
   
 0.967
CBFB
Core-binding factor subunit beta.
    
 
 0.955
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.