STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBL4BUbiquitin-like domain-containing protein. (57 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.875
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.835
ENSECAP00000023797
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.835
BAG6
BCL2 associated athanogene 6.
    
 0.809
NBR1
NBR1 autophagy cargo receptor.
   
 0.772
UBXN7
UBX domain protein 7.
    
 0.771
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.771
TRAF7
TNF receptor associated factor 7.
   
 0.743
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.736
RPS24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.722
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.