STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100062681Cylicin_N domain-containing protein. (398 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.696
LOC100065102
BTB domain-containing protein.
   
 
 0.680
LOC100065605
BTB domain-containing protein.
   
 
 0.678
LOC100066986
BTB domain-containing protein.
   
 
 0.677
ENSECAP00000024757
Uncharacterized protein.
   
 
 0.677
LOC111770646
BTB domain-containing protein.
   
 
 0.677
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
      
 0.560
ARMC3
Armadillo repeat containing 3.
    
 
 0.520
F7A6T3_HORSE
ACB domain-containing protein.
   
  
 0.493
SPATA6
Spermatogenesis associated 6.
      
 0.483
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.