STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100050835Cystatin domain-containing protein; Belongs to the cystatin family. (98 aa)    
Predicted Functional Partners:
CST3
Cystatin C; Belongs to the cystatin family.
   
 
 0.680
ISYNA1
Inositol-3-phosphate synthase 1.
      
 0.649
S100A13
S100 calcium binding protein A13; Belongs to the S-100 family.
      
 0.636
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 
 0.553
LOC100057768
Beta_elim_lyase domain-containing protein.
      
 0.538
CTSL
Cathepsin L; Belongs to the peptidase C1 family.
   
 
 0.450
F13A1
Coagulation factor XIII A chain.
     
 0.444
PFN4
Profilin; Belongs to the profilin family.
      
 0.406
PFN2
Profilin; Belongs to the profilin family.
      
 0.405
CTSS
Cathepsin S; Belongs to the peptidase C1 family.
   
 
 0.402
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.