STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN4PDZ domain containing ring finger 4. (1039 aa)    
Predicted Functional Partners:
BEX5
Uncharacterized protein.
      
 0.835
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.721
STK32B
Serine/threonine kinase 32B; Belongs to the protein kinase superfamily.
   
 
 0.707
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
   
 0.694
GRAMD1B
GRAM domain containing 1B.
      
 0.675
MPZL3
Myelin protein zero like 3.
      
 0.672
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.664
EXOC6B
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.656
MICAL3
Microtubule associated monooxygenase, calponin and LIM domain containing 3.
    
 
 0.631
ANO4
Anoctamin.
      
 0.628
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.