STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN14Uncharacterized protein; Belongs to the peptidase C2 family. (556 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
 
 
 0.958
LCLAT1
Lysocardiolipin acyltransferase 1.
      
 0.795
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
   
 
 0.677
GAS2L2
Growth arrest specific 2 like 2.
    
 
 0.634
CFAP58
Cilia and flagella associated protein 58.
      
 0.634
ITSN2
Intersectin 2.
   
 
 0.608
TM4SF4
Transmembrane 4 L six family member 4.
      
 0.597
CAST
Calpastatin.
   
 0.589
PROKR1
Prokineticin receptor 1; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.587
SLC6A12
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.564
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.