STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102149794Uncharacterized protein. (468 aa)    
Predicted Functional Partners:
LOC111769983
BPI fold containing family A member 2.
      
 0.739
BPIFA2
BPI fold containing family A member 2.
      
 0.739
LOC100061598
EF-hand domain-containing protein; Belongs to the S-100 family.
   
 
 0.713
PTX3
Pentaxin.
      
 0.635
ELANE
Elastase, neutrophil expressed; Belongs to the peptidase S1 family.
   
 0.606
TCN1
Transcobalamin 1.
   
  
 0.506
LOC100069985
Uncharacterized protein.
   
   
0.499
PRTN3
Peptidase S1 domain-containing protein.
   
 0.494
ETHE1
ETHE1 persulfide dioxygenase.
      
 0.476
LYPD3
LY6/PLAUR domain containing 3.
      
 0.465
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.