STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO1HMyosin IH; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1038 aa)    
Predicted Functional Partners:
PHOX2B
Paired like homeobox 2B.
   
  
 0.573
WHRN
Whirlin.
    
 0.535
USH1C
USH1 protein network component harmonin.
   
 0.532
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.504
USH1G
USH1 protein network component sans.
   
 0.503
ACTN3
Actinin alpha 3 (gene/pseudogene).
      
 0.480
CPA2
Uncharacterized protein.
      
 0.474
ACTA1
Actin alpha 1, skeletal muscle.
    
 0.472
SLFN12
AlbA_2 domain-containing protein.
      
 0.472
CTRC
Chymotrypsin C; Belongs to the peptidase S1 family.
      
 0.449
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.