STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCDC2CUncharacterized protein. (610 aa)    
Predicted Functional Partners:
CFAP36
Cilia and flagella associated protein 36.
   
  
 0.717
DNAAF4
Dynein axonemal assembly factor 4.
      
 0.628
POT1
Protection of telomeres 1.
    
 
 0.581
TMEM82
Transmembrane protein 82.
   
  
 0.560
TMEM200A
Transmembrane protein 200A.
      
 0.531
MARVELD1
MARVEL domain containing 1.
      
 0.487
GABRE
Gamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.479
NTAN1
N-terminal asparagine amidase.
      
 0.474
CEP78
Centrosomal protein 78.
   
  
 0.474
TBX22
T-box transcription factor 22.
      
 0.472
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.