STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100064692Uncharacterized protein. (223 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.821
RABGEF1
RAB guanine nucleotide exchange factor 1.
   
 0.801
CASC1
Cancer susceptibility 1.
   
    0.798
CCDC24
Coiled-coil domain containing 24.
   
    0.797
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 0.751
RAB11FIP4
RAB11 family interacting protein 4.
   
 0.745
RAB11FIP3
Uncharacterized protein.
   
 0.744
CEP19
Centrosomal protein 19.
    
 
 0.739
ITSN1
Intersectin 1.
   
 0.724
RAB3IL1
RAB3A interacting protein like 1.
    
 0.721
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.