STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA5Spermatogenesis associated 5. (894 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.995
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.868
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 0.862
ATXN3
Josephin domain-containing protein.
   
 0.828
UBXN1
UBX domain protein 1.
   
 0.807
NSFL1C
NSFL1 cofactor.
   
 0.782
UBXN2B
UBX domain protein 2B.
   
 0.782
FAAP100
FA core complex associated protein 100.
   
 0.776
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.776
PSMB2
Proteasome subunit beta.
   
 0.775
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (18%) [HD]