STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOBEC1Apolipoprotein B mRNA editing enzyme catalytic subunit 1. (236 aa)    
Predicted Functional Partners:
APOBEC4
Apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4.
   
 
 0.972
A1CF
APOBEC1 complementation factor.
   
 0.939
APOB
Apolipoprotein B.
      
 0.899
TDG
Thymine DNA glycosylase.
      
 0.834
CBX6
Chromobox 6.
      
 0.659
APOBEC2
Apolipoprotein B mRNA editing enzyme catalytic subunit 2.
    
0.640
CDA
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
      
 0.591
ADAR
Adenosine deaminase RNA specific.
      
 0.566
ADAT2
Adenosine deaminase tRNA specific 2.
   
  
 0.566
UNG
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
     
 0.555
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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