STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD4ASterile alpha motif domain containing 4A. (758 aa)    
Predicted Functional Partners:
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
   
  
 0.623
CCDC80
Coiled-coil domain containing 80.
  
 
 0.595
MAB21L2
Mab-21 like 2.
      
 0.563
SSBP3
Single stranded DNA binding protein 3.
      
 0.563
ZC3HAV1L
Zinc finger CCCH-type containing, antiviral 1 like.
   
  
 0.543
SSH2
Slingshot protein phosphatase 2.
   
 
 0.517
PMAIP1
Phorbol-12-myristate-13-acetate-induced protein 1.
      
 0.512
RBM43
RNA binding motif protein 43.
   
  
 0.506
LNPEP
Leucyl and cystinyl aminopeptidase.
    
 
 0.497
CYTIP
Cytohesin 1 interacting protein.
   
 
 0.493
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.