STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1BGRAM domain containing 1B. (960 aa)    
Predicted Functional Partners:
ITIH5
Inter-alpha-trypsin inhibitor heavy chain 5.
   
 
 0.725
VGLL3
Vestigial like family member 3.
      
 0.701
VSNL1
Visinin like 1.
      
 0.697
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
     
 0.692
HMX2
H6 family homeobox 2.
      
 0.685
HMX3
H6 family homeobox 3.
      
 0.685
TRAPPC10
Uncharacterized protein.
    
 
 0.679
PDZRN4
PDZ domain containing ring finger 4.
      
 0.675
ANO4
Anoctamin.
      
 0.671
GARNL3
Ral GEF with PH domain and SH3 binding motif 1.
      
 0.670
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.