STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIBP1PPFIA binding protein 1. (1054 aa)    
Predicted Functional Partners:
SMCO2
Single-pass membrane protein with coiled-coil domains 2.
      
 0.833
GNL2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
      
 0.770
RIMBP2
RIMS binding protein 2.
      
 0.740
PTPRF
Protein tyrosine phosphatase receptor type F.
     
 0.719
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
   
  
 0.698
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
      
 0.691
PPFIA4
PTPRF interacting protein alpha 4.
   
0.672
PPFIA2
PTPRF interacting protein alpha 2.
   
0.672
PPFIA1
PTPRF interacting protein alpha 1.
   
0.658
LOC111775940
SAM domain-containing protein.
   
0.658
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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