STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECAP00000038064Uncharacterized protein. (335 aa)    
Predicted Functional Partners:
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.676
ATXN2
Ataxin 2.
   
 
 0.630
DHX15
DEAH-box helicase 15.
   
 0.613
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.603
FAM98B
Family with sequence similarity 98 member B.
    
 0.600
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.596
LSM12
LSM12 homolog.
   
 
 0.585
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.578
HNRNPC
RRM domain-containing protein.
   
 0.577
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H1.
   
 0.573
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.