STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBTubby-like protein; Belongs to the TUB family. (657 aa)    
Predicted Functional Partners:
IFT140
Intraflagellar transport 140.
    
 0.671
RPL10
Ribosomal protein L10.
      
 0.650
ARL13B
ADP ribosylation factor like GTPase 13B.
   
  
 0.648
IFT122
Intraflagellar transport 122.
   
 0.614
WDR19
WD repeat domain 19.
    
 0.611
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.603
PCNT
Pericentrin.
    
 
 0.578
WDR35
WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking.
    
 0.567
GPR161
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
     
 0.540
NEDD1
NEDD1 gamma-tubulin ring complex targeting factor.
      
 0.518
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.