STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCBP3Poly(rC) binding protein 3. (446 aa)    
Predicted Functional Partners:
TAF11
TATA-box binding protein associated factor 11.
    
 
 0.727
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
    
 
 0.674
RNF11
Ring finger protein 11.
     
 0.635
SRSF1
Serine and arginine rich splicing factor 1.
   
 0.599
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.595
ZNF827
Zinc finger protein 827.
    
 
 0.585
DCLRE1B
DNA cross-link repair 1B.
   
 
 0.581
ZNF524
Zinc finger protein 524.
    
 
 0.580
ZBTB48
Zinc finger and BTB domain containing 48.
    
 
 0.578
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.571
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.