STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX5Paired box 5. (389 aa)    
Predicted Functional Partners:
IRF4
Interferon regulatory factor 4.
   
  
 0.862
CD19
CD19 molecule.
   
  
 0.845
BCL6
BCL6 transcription repressor.
    
 
 0.822
AICDA
Activation induced cytidine deaminase.
   
  
 0.807
BACH2
BTB domain and CNC homolog 2.
   
 
 0.771
EBF1
EBF transcription factor 1.
   
  
 0.764
ETS1
ETS proto-oncogene 1, transcription factor.
   
 
 0.760
CD79A
CD79a molecule.
   
  
 0.748
RUNX1
RUNX family transcription factor 1.
   
 0.663
TNFRSF13C
B cell-activating factor receptor.
   
  
 0.659
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.