STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100057465Myb-like domain-containing protein. (2235 aa)    
Predicted Functional Partners:
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
      
 0.737
CRAMP1
Cramped chromatin regulator homolog 1.
   
 
 0.699
MAMLD1
Mastermind like domain containing 1.
    
 0.617
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.554
LSM10
LSM10, U7 small nuclear RNA associated.
   
 0.552
RAD54L2
RAD54 like 2.
   
 0.550
SPIB
DNA polymerase; Belongs to the ETS family.
   
 0.532
FANCM
FA complementation group M.
   
 0.527
POLD2
DNA polymerase delta 2, accessory subunit.
   
 0.517
GOLPH3L
Golgi phosphoprotein 3 like.
   
 
 0.506
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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