STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2AC5Histone H2A; Belongs to the histone H2A family. (133 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.837
LOC100054473
Histone H2B; Belongs to the histone H2B family.
 
 0.630
KDM6B
Lysine demethylase 6B.
    
 0.623
KDM6A
Lysine demethylase 6A.
    
 0.623
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.580
H2BC13
Histone H2B; Belongs to the histone H2B family.
 
 0.563
H2BC18
Histone H2B; Belongs to the histone H2B family.
 
 0.557
LOC100054193
Histone H2B; Belongs to the histone H2B family.
 
 0.556
H2BC1
Histone H2B; Belongs to the histone H2B family.
 
 0.554
POLR2C
RNA polymerase II subunit C.
    
 0.553
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.