STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETM2Leucine zipper and EF-hand containing transmembrane protein 2. (491 aa)    
Predicted Functional Partners:
RHBDD3
Rhomboid domain containing 3.
      
 0.827
FAM118A
Family with sequence similarity 118 member A.
    
 
 0.826
TMEM39B
Transmembrane protein 39B.
      
 0.799
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
   
 
 0.762
REEP6
Receptor expression-enhancing protein.
      
 0.697
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.614
PLD6
Phospholipase D family member 6.
      
 0.603
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
    
 
 0.577
BBS9
Bardet-Biedl syndrome 9.
      
 0.573
ZMAT4
Zinc finger matrin-type 4.
      
 0.569
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.