STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100062658RING-type domain-containing protein. (256 aa)    
Predicted Functional Partners:
AUTS2
Activator of transcription and developmental regulator AUTS2.
    
 0.923
RING1
Ring finger protein 1.
   
 0.891
RNF2
Ring finger protein 2.
   
 0.886
CBX8
Chromobox 8.
    
 0.857
RYBP
RING1 and YY1 binding protein.
    
 0.854
CBX2
Chromobox 2.
    
 0.833
CBX4
Chromobox 4.
    
 0.825
CBX7
Chromobox 7.
    
 0.821
CBX6
Chromobox 6.
    
 0.796
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.779
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.