STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM222AFamily with sequence similarity 222 member A. (453 aa)    
Predicted Functional Partners:
SCYL1
SCY1 like pseudokinase 1.
      
 0.703
PPP1R32
Protein phosphatase 1 regulatory subunit 32.
      
 0.482
C4H7orf57
Chromosome 4 C7orf57 homolog.
      
 0.481
MTF1
Metal regulatory transcription factor 1.
      
 0.477
GABPB1
GA binding protein transcription factor subunit beta 1.
      
 0.476
DUSP15
Dual specificity phosphatase 15; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.476
TOMM40
Translocase of outer mitochondrial membrane 40.
      
 0.471
PCDH18
Protocadherin 18.
      
 0.435
FAM111B
Family with sequence similarity 111 member B.
      
 0.433
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.433
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.