STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNHIT3Zinc finger HIT-type containing 3. (156 aa)    
Predicted Functional Partners:
ZNHIT6
Zinc finger HIT-type containing 6.
    
 0.933
RMND5A
Required for meiotic nuclear division 5 homolog A.
      
 0.854
SMTNL2
Smoothelin like 2.
      
 0.850
NOP58
NOP58 ribonucleoprotein.
   
 0.804
WDR37
WD repeat domain 37.
      
 0.799
FBXO28
F-box protein 28.
      
 0.795
ZNF483
Zinc finger protein 483.
    
 
 0.755
LRCH3
Leucine rich repeats and calponin homology domain containing 3.
      
 0.740
NOP56
NOP56 ribonucleoprotein.
   
 
 0.733
PIH1D1
PIH1 domain containing 1.
   
 
 0.722
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.