Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD28 | CD4 | ENSECAP00000047018 | ENSECAP00000007248 | CD28 molecule. | CD4 molecule. | 0.848 |
CD28 | CD40 | ENSECAP00000047018 | ENSECAP00000014907 | CD28 molecule. | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | 0.575 |
CD28 | CD40LG | ENSECAP00000047018 | ENSECAP00000050128 | CD28 molecule. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.773 |
CD28 | CD80 | ENSECAP00000047018 | ENSECAP00000033208 | CD28 molecule. | CD80 molecule. | 0.998 |
CD28 | CD86 | ENSECAP00000047018 | ENSECAP00000040346 | CD28 molecule. | CD86 molecule. | 0.996 |
CD28 | CTLA4 | ENSECAP00000047018 | ENSECAP00000002814 | CD28 molecule. | Cytotoxic T-lymphocyte associated protein 4. | 0.665 |
CD28 | IFNG | ENSECAP00000047018 | ENSECAP00000030547 | CD28 molecule. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. | 0.745 |
CD28 | IL10 | ENSECAP00000047018 | ENSECAP00000007097 | CD28 molecule. | Interleukin-10; Major immune regulatory cytokine that acts on many cells of the immune system where it has profound anti-inflammatory functions, limiting excessive tissue disruption caused by inflammation. Mechanistically, IL10 binds to its heterotetrameric receptor comprising IL10RA and IL10RB leading to JAK1 and STAT2-mediated phosphorylation of STAT3. In turn, STAT3 translocates to the nucleus where it drives expression of anti-inflammatory mediators. Targets antigen-presenting cells (APCs) such as macrophages and monocytes and inhibits their release of pro-inflammatory cytokines in [...] | 0.577 |
CD4 | CD28 | ENSECAP00000007248 | ENSECAP00000047018 | CD4 molecule. | CD28 molecule. | 0.848 |
CD4 | CD40 | ENSECAP00000007248 | ENSECAP00000014907 | CD4 molecule. | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | 0.924 |
CD4 | CD40LG | ENSECAP00000007248 | ENSECAP00000050128 | CD4 molecule. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.946 |
CD4 | CD80 | ENSECAP00000007248 | ENSECAP00000033208 | CD4 molecule. | CD80 molecule. | 0.943 |
CD4 | CD83 | ENSECAP00000007248 | ENSECAP00000036668 | CD4 molecule. | CD83 molecule. | 0.725 |
CD4 | CD86 | ENSECAP00000007248 | ENSECAP00000040346 | CD4 molecule. | CD86 molecule. | 0.939 |
CD4 | CSF2 | ENSECAP00000007248 | ENSECAP00000007561 | CD4 molecule. | Granulocyte-macrophage colony-stimulating factor. | 0.789 |
CD4 | CTLA4 | ENSECAP00000007248 | ENSECAP00000002814 | CD4 molecule. | Cytotoxic T-lymphocyte associated protein 4. | 0.954 |
CD4 | IFNG | ENSECAP00000007248 | ENSECAP00000030547 | CD4 molecule. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. | 0.971 |
CD4 | IL10 | ENSECAP00000007248 | ENSECAP00000007097 | CD4 molecule. | Interleukin-10; Major immune regulatory cytokine that acts on many cells of the immune system where it has profound anti-inflammatory functions, limiting excessive tissue disruption caused by inflammation. Mechanistically, IL10 binds to its heterotetrameric receptor comprising IL10RA and IL10RB leading to JAK1 and STAT2-mediated phosphorylation of STAT3. In turn, STAT3 translocates to the nucleus where it drives expression of anti-inflammatory mediators. Targets antigen-presenting cells (APCs) such as macrophages and monocytes and inhibits their release of pro-inflammatory cytokines in [...] | 0.969 |
CD40 | CD28 | ENSECAP00000014907 | ENSECAP00000047018 | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | CD28 molecule. | 0.575 |
CD40 | CD4 | ENSECAP00000014907 | ENSECAP00000007248 | Tumor necrosis factor receptor superfamily member 5; Receptor for TNFSF5/CD40LG (By similarity). Transduces TRAF6- and MAP3K8-mediated signals that activate ERK in macrophages and B cells, leading to induction of immunoglobulin secretion (By similarity). | CD4 molecule. | 0.924 |
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