STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALPK1Alpha kinase 1. (1244 aa)    
Predicted Functional Partners:
TIFA
TRAF interacting protein with forkhead associated domain.
   
 
 0.975
TDRD7
Tudor domain containing 7.
   
    0.797
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
     
 0.713
TRIM13
Tripartite motif containing 13.
      
 0.655
AGMO
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
      
 0.600
NHEJ1
Non-homologous end joining factor 1.
      
 0.575
SGCZ
Sarcoglycan zeta.
      
 0.570
ERN1
Endoplasmic reticulum to nucleus signaling 1.
   
 
 0.534
IRAK2
Interleukin 1 receptor associated kinase 2.
     
 0.515
MYO1A
Myosin IA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.491
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.