STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICAL3Microtubule associated monooxygenase, calponin and LIM domain containing 3. (2259 aa)    
Predicted Functional Partners:
RAB13
RAB13, member RAS oncogene family.
   
 
 0.779
EHBP1L1
C2 NT-type domain-containing protein.
   
 
 0.744
STK32B
Serine/threonine kinase 32B; Belongs to the protein kinase superfamily.
   
  
 0.682
RAB10
RAB10, member RAS oncogene family.
   
 
 0.664
MPZL3
Myelin protein zero like 3.
      
 0.659
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.650
PDZRN4
PDZ domain containing ring finger 4.
    
 
 0.631
APOBR
Apolipoprotein B receptor.
   
  
 0.585
RAB8B
Uncharacterized protein.
   
 
 0.585
EXTL3
Exostosin like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.560
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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