STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEFB108BBeta-defensin; Has antibacterial activity; Belongs to the beta-defensin family. (83 aa)    
Predicted Functional Partners:
DEFB1
Defensin beta 1.
     
 0.617
ENSECAP00000024266
Uncharacterized protein.
     
 0.602
F6TZM9_HORSE
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.586
DEFB123
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.586
LOC100629456
Beta-defensin 103A; Exhibits antimicrobial activity against Gram-positive and Gram-negative bacteria; Belongs to the beta-defensin family.
     
 0.525
ENSECAP00000034594
Uncharacterized protein.
     
 0.525
LYZL4
Lysozyme like 4; Belongs to the glycosyl hydrolase 22 family.
      
 0.481
LOC100054193
Histone H2B; Belongs to the histone H2B family.
      
 0.433
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.