STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCMH1Scm polycomb group protein homolog 1. (663 aa)    
Predicted Functional Partners:
LOC102148742
RING-type domain-containing protein.
   
 0.962
CBX8
Chromobox 8.
   
 0.940
CBX2
Chromobox 2.
    
 0.920
RNF2
Ring finger protein 2.
   
 0.904
RING1
Ring finger protein 1.
   
 0.901
CBX4
Chromobox 4.
   
 0.899
PHC1
Polyhomeotic homolog 1.
   
0.886
PCGF2
Polycomb group ring finger 2.
   
 0.862
TFAP4
Transcription factor AP-4.
   
  
 0.859
PHC3
Polyhomeotic homolog 3.
   
0.810
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.