STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (624 aa)    
Predicted Functional Partners:
NEB
Nebulin.
   
 0.845
KLHL40
Kelch like family member 40.
   
 
 0.783
KLHL41
Kelch like family member 41.
   
 
 0.747
KBTBD13
Kelch repeat and BTB domain containing 13.
   
  
 0.718
TNNT1
Troponin T1, slow skeletal type.
   
 
 0.679
NRAP
Nebulin related anchoring protein.
   
 0.674
MYOM2
Myomesin 2.
   
  
 0.671
MCTP2
Multiple C2 and transmembrane domain containing 2.
   
  
 0.667
TNNI2
Troponin I2, fast skeletal type.
   
 
 0.649
MYOZ2
Myozenin 2.
   
  
 0.630
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.