STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB11FIP3Uncharacterized protein. (1223 aa)    
Predicted Functional Partners:
RAB3IP
Sec2p domain-containing protein.
    
 0.903
RAB11FIP2
RAB11 family interacting protein 2.
    
 
 0.876
ASAP1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1.
   
 0.864
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.852
PRR35
Proline rich 35.
      
 0.826
RRP36
Ribosomal RNA processing 36.
      
 0.816
RAB11B
RAB11B, member RAS oncogene family.
    
 0.812
RAB11A
RAB11A, member RAS oncogene family.
    
 0.812
CCDC36
Coiled-coil domain containing 36.
   
  
 0.810
SIPA1L2
Signal induced proliferation associated 1 like 2.
   
  
 0.793
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.