STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR2Cadherin related family member 2. (1303 aa)    
Predicted Functional Partners:
CDHR5
Cadherin related family member 5.
   
 0.948
CTNNB1
Beta catenin 1.
    
 0.815
JUP
Junction plakoglobin.
    
 0.815
PCDH15
Protocadherin related 15.
   
0.808
AFDN
Afadin, adherens junction formation factor.
   
 
 0.749
CTNNA2
Catenin alpha 2.
   
 0.746
CTNNA1
Catenin alpha 1.
    
 0.743
USH1C
USH1 protein network component harmonin.
   
 
 0.740
CTNND1
Catenin delta 1.
   
 0.725
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
   
  
 0.721
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.