STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALM3Uncharacterized protein; Belongs to the calmodulin family. (222 aa)    
Predicted Functional Partners:
MRPS21
Mitochondrial ribosomal protein S21.
   
 0.893
AP1G2
AP-1 complex subunit gamma.
 
 
    0.834
SLC25A29
Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.694
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.661
TNNT3
Troponin T3, fast skeletal type.
   
 0.587
WDR90
WD repeat domain 90.
   
 0.524
DAG1
Dystroglycan 1.
      
 0.512
ACADVL
Acyl-CoA dehydrogenase very long chain.
   
  
 0.484
MAPK1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 
 0.467
FKBP1A
Peptidylprolyl isomerase.
   
 0.437
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.